Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825895.1_cds_XP_016502481.1_16117
CDS Infomation

[gene=LOC107820673] [db_xref=GeneID:107820673] [protein=long-chain-alcohol oxidase FAO1-like] [protein_id=XP_016502481.1] [location=join(48366..48575,48972..49244,51169..52914)] [gbkey=CDS]
Sequence

ATGGAGAAAAAGAGTCATCCTTTACTTAGAGGAGGAAGAAGAGAAACGAAGTATAGTCAT
GGCTTTTCCTCTTCAGAAATGGAAACTTTGACTAGTATTTGTGAAACTATTCTTCCTCCT
CTTCCTCAAAATGAAATCCCAGAAAAAAATAGTCATAATATTCAATACCTTCATAAAGCT
TCTGCTTCTCAGTATCCAATTCCTGATGAGTGTGCAGAGGTTGTAATGAAAAGGGGGTTT
TTAGAAGCAATAATCTTGGTGAGGGGTTTGTTAAGAATACTATCAACAAGAATTGGAACT
TTGTTACTTTGTGGATCATTTTGTTTTGTCCAAAAATGGCCTTACATCAATAAATTCTGT
GATATTCCATTGGAGAAAAGAGAGATTGTGCTGCAGAAATGGTTCAAGAACAGATTCTTA
ACTCCAGTTAGATTGGCATTTATGTTTATCAAATTCTTGTGTCTCTACATCTTCTTTACT
CAGGTTGGTGAAGATTCAAAAAATCAAGCATGGGATGACATTGGATATCAAGTAGACAAT
GAAGAGAAGCATTCAGAAACAGCTGAAGAAAGACCTCTTGAGAAGGGAATTGTAGAGGCA
ATTTATGAAACAGAATCAACTATAGTCAAGTCCCTTGTCCAAAAAGGCCTAAAAGTTATA
GATGATACCAAAAACAACATGTACAAAGTTCAATGTGATGTTGTTATTGTTGGTTCAGGT
TGTGGTGGAGGTGTTGCAGCAAGTGTTCTTGCAAGTTCTGGCCACAAAGTTATCGTTCTC
GAAAAAGGAAACTACTACACCAAATCCGACTATTCGTCCCTTGAAGGACCTTCAATGAAC
CAAATGTATGAATCAGGAGGAATACTCTCAACTTTGGATGCTAAAATAATGATCATGGCT
GGATCAACAGTTGGTGGTGGCTCCGCGATTAATTGGTCAGCCTGCATTAAGACTCCTGAT
TGTGTTATACAAGAATGGGGCGATGATAAAAGACTACCAATTTTCCAAAGCCCTGAGTAT
GTATCTGCTATGGACAACGTTTGTGAACGGATCGGTGTGACAGAAAACTGCACACAAGAA
GGTCTTCAGAACCAAATTCTCCGAAAAGGGTGTGAGAATCTTGGTCTTGAAGTTGAAGGC
GTGGCACGAAACACATCCGAGAATCATTATTGTGGCTCGTGCTGCTACGGATGTAGAAGA
GGTGAGAAGAAAGGAACTGATACAACTTGGCTGGTGGATGCTGTGGACAGTGGAGCTGTG
ATTATAACAGGATGCAAAGCTGAGAGATTCATACTAGAAAAGAACAAGTATGGGAAAACA
AGAGATAAGAAATGCTTGGGAGTGATTGCAACTAGTACAAATAAAGATATCACAAAGAGG
ATATGTATTGAGGCCAAGGTAACCATTTCAGCTTGTGGTTCTCTTTTGACACCTCCACTT
ATGATTTCTAGTGGTTTGAGAAATCCGAACATTGGCCGAAATCTCCATCTTCATCCGGTT
ATAATGGCATGGGGATACTTTCCCGAGTCCGATTCAGACCTCAAGGGAAAAATATATGAA
GGAGGAATCATTACCTCAGTACACAAAGTCGGGAGTTATGATTCCAATGTTAGAGCTATA
ATAGAAGCTACTGCTTTAGGACCAGGTTCGTTCGCTGCCTTGTGTCCTTGGACATCTGGT
GAGGACTTAAAGAATAGGTTACTCAAATATTCAAGAACAGCGCATTTGTTTGCAATGGTT
AAAGATGTTGGATCGGGGGAAGTCAGATCGGATGGAAGAATAAGCTATACGTTCAATGCT
ACGGACAAAGAAAGTTTGAAGCAAGGGCTAAAACAGGCTTTAAGGATCTTGATAGCAGCA
GGAGCTGATGAGGTAGGTACTCAACGTAGCGATGGACAGAGAATGAAATGTAAGGGAAAA
AGTGAAAAAGAAATCGAGGCTTTTCTTAATACAGTCACAGCAGCTGAGGGACCAAAGTCA
CTTGTAAAGAATTTCACAACTTATAGTTCTGCTCATCAGATGGGAAGTTGCAGGATGGGA
ATGAGCGAAAAAGATGGCGCTGTCGATGAGAATGGAGAGAGTTGGGAAGCAAATGGCTTA
TTTGTTTGTGATGCTAGTGTTTTGCCTGGTGCTGTTGGTGTAAATCCAATGATCACTATT
CAGTCCACTGCATATTGTCTATCCAAGAAAATAGCAGAGATGATAAAAGAAGGCAAATTC
TCAAGATAA

Peptide Sequence

PEP ID

XP_016502481.1
PEP Infomation

PREDICTED: long-chain-alcohol oxidase FAO1-like [Nicotiana tabacum]
Sequence

MEKKSHPLLRGGRRETKYSHGFSSSEMETLTSICETILPPLPQNEIPEKNSHNIQYLHKA
SASQYPIPDECAEVVMKRGFLEAIILVRGLLRILSTRIGTLLLCGSFCFVQKWPYINKFC
DIPLEKREIVLQKWFKNRFLTPVRLAFMFIKFLCLYIFFTQVGEDSKNQAWDDIGYQVDN
EEKHSETAEERPLEKGIVEAIYETESTIVKSLVQKGLKVIDDTKNNMYKVQCDVVIVGSG
CGGGVAASVLASSGHKVIVLEKGNYYTKSDYSSLEGPSMNQMYESGGILSTLDAKIMIMA
GSTVGGGSAINWSACIKTPDCVIQEWGDDKRLPIFQSPEYVSAMDNVCERIGVTENCTQE
GLQNQILRKGCENLGLEVEGVARNTSENHYCGSCCYGCRRGEKKGTDTTWLVDAVDSGAV
IITGCKAERFILEKNKYGKTRDKKCLGVIATSTNKDITKRICIEAKVTISACGSLLTPPL
MISSGLRNPNIGRNLHLHPVIMAWGYFPESDSDLKGKIYEGGIITSVHKVGSYDSNVRAI
IEATALGPGSFAALCPWTSGEDLKNRLLKYSRTAHLFAMVKDVGSGEVRSDGRISYTFNA
TDKESLKQGLKQALRILIAAGADEVGTQRSDGQRMKCKGKSEKEIEAFLNTVTAAEGPKS
LVKNFTTYSSAHQMGSCRMGMSEKDGAVDENGESWEANGLFVCDASVLPGAVGVNPMITI
QSTAYCLSKKIAEMIKEGKFSR

Transcript Sequence

Gene sequence data has not been registered.